RNDr. Michal Choma, Ph.D.

  • Unit:
    PřF Department of Ecosystem Biology | Researcher - Academic
  • E-mail:
    This email address is being protected from spambots. You need JavaScript enabled to view it.
  • Phone number:
    +420 389 032 363
  • Room:
    010302044 laboratoř 044 - 2. patro - budova B - Blažkův pavilon (laboratoř 357)
    Branišovská 1716/31c, 370 05 České Budějovice
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Projects

Projekty lorem ipsum:

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CV

Education

  • 1998 - 2006  Grammar school Písek
  • 2006 - 2009  Faculty of Science, University of South Bohemia - B.Sc in Environmental Management
  • 2009 - 2012  Faculty of Science, University of South Bohemia - M.Sc in Applied ecology
  • 2012 - 2020  Faculty of Science, University of South Bohemia - Ph.D. in Ecosystem biology

Employment

  • 2012 - present day  University of South Bohemia, Faculty of Science, Department of Ecosystem Biology - research worker and lecturer (since 2019)

Creative activity

Scientific interests:

Composition and function of soil microbial communities in disturbed forest ecosystems

  • effect of bark-beetle induced forest dieback and subsequent regenration
  • effect of atmospheric deposition - acidification and nitrogen input

Links

 

The most significant IF publications 2018 - 2023

Choma, M., Bače, R., Čapek, P., Kaňa, J., Kaštovská, E., Tahovská, K., Kopáček, J., 2023. Surviving trees are key elements in the fate of ectomycorrhizal community after severe bark-beetle forest disturbance. FEMS Microbiology Ecology 99, fiad082. doi:10.1093/femsec/fiad082
 
Čapek, P., Choma, M., Kaštovská, E., Tahovská, K., Glanville, H.C., Šantrůčková, H., 2023. Revisiting soil microbial biomass: Considering changes in composition with growth rate. Soil Biology and Biochemistry 184, 109103. doi:10.1016/j.soilbio.2023.109103
 
Čapek, P., Choma, M., Tahovská, K., Kaňa, J., Kopáček, J., Šantrůčková, H., 2021. Coupling the resource stoichiometry and microbial biomass turnover to predict nutrient mineralization and immobilization in soil. Geoderma 385, 114884. doi:10.1016/j.geoderma.2020.114884
 
Choma, M., Tahovská, K., Kaštovská, E., Bárta, J., Růžek, M., Oulehle, F., 2020. Bacteria but not fungi respond to soil acidification rapidly and consistently in both a spruce and beech forest. FEMS Microbiology Ecology 96, fiaa174. doi:10.1093/femsec/fiaa174
 
Tahovská, K., Choma, M., Kaštovská, E., Oulehle, F., Bárta, J., Šantrůčková, H., Moldan, F., 2020. Positive response of soil microbes to long-term nitrogen input in spruce forest: Results from Gårdsjön whole-catchment N-addition experiment. Soil Biology & Biochemistry 143, 107732. doi:10.1016/j.soilbio.2020.107732

 

Other significant publication activity:

Choma M., 2023. Půdní mikrobiom a jeho role v lesních ekosystémech, in: Rotter, P., Purchart, L. (Eds.), Ekologie lesa: Jak se les mění a funguje, 1st ed. Mendelova univerzita v Brně. doi:10.11118/978-80-7509-927-3

 

List of all IF publications:

Kaštovská, E., Choma, M., Angst, G., Remus, R., Augustin, J., Kolb, S., Wirth, S., 2024. Root but not shoot litter fostered the formation of mineral-associated organic matter in eroded arable soils. Soil and Tillage Research 235, 105871. doi:10.1016/j.still.2023.105871
 
Kaňa, J., Kaštovská, E., Choma, M., Čapek, P., Tahovská, K., Kopáček, J., 2023. Undeveloped till soils in scree areas are an overlooked important phosphorus source for waters in alpine catchments. Scientific Reports 13, 14725. doi:10.1038/s41598-023-42013-4
 
Choma, M., Bače, R., Čapek, P., Kaňa, J., Kaštovská, E., Tahovská, K., Kopáček, J., 2023. Surviving trees are key elements in the fate of ectomycorrhizal community after severe bark-beetle forest disturbance. FEMS Microbiology Ecology 99, fiad082. doi:10.1093/femsec/fiad082
 
Čapek, P., Choma, M., Kaštovská, E., Tahovská, K., Glanville, H.C., Šantrůčková, H., 2023. Revisiting soil microbial biomass: Considering changes in composition with growth rate. Soil Biology and Biochemistry 184, 109103. doi:10.1016/j.soilbio.2023.109103
 
Tahovská, K., Kaštovská, E., Choma, M., Čapek, P., Bárta, J., Oulehle, F., 2023. Ammonia oxidation and nitrate reduction marker genes are key indicators of nitrogen losses in temperate forest catchments. Environmental Microbiology 1462-2920.16441. doi:10.1111/1462-2920.16441
 
Kopáček, J., Čapek, P., Choma, M., Cudlín, P., Kaňa, J., Kopáček, M., Porcal, P., Šantrůčková, H., Tahovská, K., Turek, J., 2023. Long-term changes in soil composition in unmanaged central European mountain spruce forests after decreased acidic deposition and a bark beetle outbreak. CATENA 222, 106839. doi:10.1016/j.catena.2022.106839
 
Kaštovská, E., Choma, M., Čapek, P., Kaňa, J., Tahovská, K., Kopáček, J., 2022. Soil warming during winter period enhanced soil N and P availability and leaching in alpine grasslands: A transplant study. PLOS ONE 17, e0272143. doi:10.1371/journal.pone.0272143
 
Choma, M., Šamonil, P., Kaštovská, E., Bárta, J., Tahovská, K., Valtera, M., Santruckova, H., 2021. Soil Microbiome Composition along the Natural Norway Spruce Forest Life Cycle. Forests 12, 410. doi:10.3390/f12040410
 
Čapek, P., Choma, M., Tahovská, K., Kaňa, J., Kopáček, J., Šantrůčková, H., 2021. Coupling the resource stoichiometry and microbial biomass turnover to predict nutrient mineralization and immobilization in soil. Geoderma 385, 114884. doi:10.1016/j.geoderma.2020.114884
 
Choma, M., Tahovská, K., Kaštovská, E., Bárta, J., Růžek, M., Oulehle, F., 2020. Bacteria but not fungi respond to soil acidification rapidly and consistently in both a spruce and beech forest. FEMS Microbiology Ecology 96, fiaa174. doi:10.1093/femsec/fiaa174
 
Tahovská, K., Choma, M., Kaštovská, E., Oulehle, F., Bárta, J., Šantrůčková, H., Moldan, F., 2020. Positive response of soil microbes to long-term nitrogen input in spruce forest: Results from Gårdsjön whole-catchment N-addition experiment. Soil Biology & Biochemistry 143, 107732. doi:10.1016/j.soilbio.2020.107732
 
Choma, M., Rappe-George, M.O., Bárta, J., Čapek, P., Kaštovská, E., Gärdenäs, A.I., Šantrůčková, H., 2017. Recovery of the ectomycorrhizal community after termination of long-term nitrogen fertilisation of a boreal Norway spruce forest. Fungal Ecology 29, 116–122. doi:10.1016/j.funeco.2016.10.002
 
Rappe-George, M.O., Choma, M., Čapek, P., Börjesson, G., Kaštovská, E., Šantrůčková, H., Gärdenäs, A.I., 2017. Indications that long-term nitrogen loading limits carbon resources for soil microbes. Soil Biology and Biochemistry 115, 310–321. doi:10.1016/j.soilbio.2017.07.015
 
Kotas, P., Choma, M., Šantrůčková, H., Lepš, J., Tříska, J., Kaštovská, E., 2017. Linking Above- and Belowground Responses to 16 Years of Fertilization, Mowing, and Removal of the Dominant Species in a Temperate Grassland. Ecosystems 20, 354–367. doi:10.1007/s10021-016-0031-x
 
Choma, M., Bárta, J., Šantrůčková, H., Urich, T., 2016. Low abundance of Archaeorhizomycetes among fungi in soil metatranscriptomes. Scientific Reports 6, 38455.

 

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Branišovská 1645/31a, 370 05 České Budějovice Tel.+420 389 032 191 | This email address is being protected from spambots. You need JavaScript enabled to view it.

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